Graph Alignment Methods for the Development of Interoperable Gene Regulation Knowledge Graphs

Description

Study of the performance of 20 entity alignment methods in knowledge graphs about gene regulation domain, with a special focus on enhancer, the most studied cis-regulatory modules.
 
The content of this repository is associated with the publication https://doi.org/10.1109/ACCESS.2025.3649436 and the Github repository https://github.com/juan-mulero/cisregEA.git
 
Mulero-Hernández, J., Almagro-Hernández, G., & Fernández-Breis, J. T. (2025). Graph Alignment Methods for the Development of Interoperable Gene Regulation Knowledge Graphs. IEEE Access, 14, 792-814. https://doi.org/10.1109/ACCESS.2025.3649436
 
@article{mulero2025graph,
  title={Graph Alignment Methods for the Development of Interoperable Gene Regulation Knowledge Graphs},
  author={Mulero-Hern{\'a}ndez, Juan and Almagro-Hern{\'a}ndez, Gin{\'e}s and Fern{\'a}ndez-Breis, Jesualdo Tom{\'a}s},
  journal={IEEE Access},
  volume={14},
  pages={792--814},
  year={2025},
  publisher={IEEE}
  doi={10.1109/ACCESS.2025.3649436}
}

Authors

DOI: 10.5281/zenodo.20765839

Publication Date: 2026-06-19

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